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6 followers · 8 following
  • Politecnico di Milano
  • Bergamo
  • 06:10 (UTC -12:00)

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Gab-23/README.md

Gabriele Oliveto

👋 Hi! I'm Gabriele Oliveto, a passionate Bioinformatics student with a background in Biological Sciences. I am currently pursuing a Doctoral program in Systems Medicine at European School of Molecular Medicine (SEMM). My primary interests are in Epigenomics and various omics fields and Machine Learning.

🔬 About Me

  • 🎓 Bachelor's degree in Biological Sciences
  • 📚 Master's degree in Bioinformatics for Computational Genomics
  • 🎗️ Ph.D Student at Istituto Europeo di Oncologia in Martin Schaefer's Lab
  • 🌱 Interested in Epigenomics and Machine Learning
  • 🧬 I enjoy working on projects that bridge biology and data science

🚀 Skills & Tools

  • Programming Languages: Python, R, Bash, Snakemake
  • Python Libraries: Familiar with pandas, numpy, scikit-learn and flask

📫 Get in Touch

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  1. FMIndexR FMIndexR Public

    Here you can find a small R package that will allow the user to build an FM index from an input FASTA file. The FM index will then be used to look for patterns using a function that implements back…

    R

  2. Genomics-Pipeline Genomics-Pipeline Public

    Brief genomics pipeline made as a project to take a set of .fastq files and perform every step (also quality controls) up to the variant calling process (outputs a complete folder with also .vcf fi…

    Shell

  3. JASPAR-Web-Service JASPAR-Web-Service Public

    Here you can find a small python project that consists in a Web application, allowing the user to interact with a local copy of JASPAR motifs database. The user will be able to retrieve motifs (and…

    Python

  4. ML-homework ML-homework Public

    Here you can find a small Machine Learning project for the study of a Codon Usage Bias dataset. The project is organized in different steps: Dataprocessing, Exploratory analysis, Clustering, Regres…

    Jupyter Notebook