Built-in agents (explore, task, code-review) do not inherit custom instructions

[naokton]

Describe the bug

Built-in agents (explore, task, code-review) do not follow custom instructions. For example, with the instruction "Never use system python. Use uv run python ... instead", these agents still invoke python or python3 directly. This causes two problems:

1. The agent's work is interrupted by a permission prompt (since uv is permitted via --allow-tool but python is not). And I have to navigate them to use uv to each agents.
2. Project packages are unavailable in the system Python environment, which can cause scripts to fail.

This is not limited to Python execution. For example, the instruction "never use /tmp" is also ignored by these agents.

Affected version

GitHub Copilot CLI 1.0.3.

Steps to reproduce the behavior

1. Add custom instruction: "Never use system python. Use uv run python ... instead"
2. Ask copilot: "Ask all built-in agents this question and report the result: When you are asked to run a python script, for example test.py, what command will you execute?"

Response example (claude-sonnet-4.6 (medium)):

Here are the results from all 4 built-in agents:

| Agent | Command |
|---|---|
| **explore** | `python3 test.py` (or `python test.py`) |
| **task** | `python test.py` (default), `python3 test.py` if Python 3 is needed |
| **general-purpose** | `uv run python test.py` |
| **code-review** | `python test.py` (or `python3 test.py` depending on environment) |

**Key finding:** Only the **general-purpose** agent correctly follows the custom instruction ("Never use system python. Use `uv run python ...` instead"). The other three agents (`explore`, `task`, `code-review`) would use `python` or `python3` directly — which is **non-compliant** with the environment's configuration.

If you need Python scripts run correctly in this environment, prefer the **general-purpose** agent, or explicitly instruct the others to use `uv run python`.

Expected behavior

All sub-agents should have access to and comply with the user's custom instructions, consistent with how the general-purpose agent already behaves.

Additional context

No response